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PhD project: The role of Gadd45 in embryonic stem cells

In the field of  “DNA demethylation” the research group of Prof. Christof Niehrs offers the following PhD project: The role of Gadd45 in embryonic stem cells 

Description:

During development, DNA demethylation plays an important role in the context of two major concepts: cellular reprogramming and differentiation. First, DNA demethylation is required to reprogram the epigenetic signature to pave the way for pluripotency in the zygote and the primordial germ cells. Second, DNA demethylation of key differentiation factors is a prerequisite for efficient differentiation. There are indications that Gadd45 proteins may be involved in both processes. We will comprehensively study the role of Gadd45 mediated DNA demethylation using induced embryonic stem cells as model system combining genome-wide expression and methylation analysis. To this aim, we will characterize ES cells lacking Gadd45 proteins. We will differentiate ES cells in vitro into different lineages and monitor how loss of Gadd45 affects differentiation. Global expression profiling by microarrays and/or RNA-sequencing in combination with global methylation profiling using MeDIP and Gadd45 ChIP-Seq will lead to the identification of direct Gadd45 target genes in this differentiation process. These newly identified target genes can be used for further molecular analysis of Gadd45 mediated DNA demethylation.     

We offer
• The possibility to work on a cutting-edge project using state-of-the-art technology in a highly motivated research team
• A stimulating, diverse and international research environment
• Advanced training opportunities
• A competitive stipend

Required qualifications
• Master or Diploma
• Motivation to solve complex biological problems
• Excellent communication skills

Starting date: 1 April 2016 or later
Duration of stipend: 3 years, with the possibility of extension
Deadline for registration (exclusively online via web form):  8 November 2015

For further questions and contact information please check our website:
http://www.imb.de/PhD

Please apply exclusively via our online form at:
https://www.imb-mainz.de/students-postdocs/international-phd-programme/apply-to-ipp/registration-and-application/

 
How to apply:
Please apply exclusively via our online form at:
https://www.imb-mainz.de/students-postdocs/international-phd-programme/apply-to-ipp/registration-and-application/
Kontakt für Bewerbungen
For further questions and contact information please check our website:
http://www.imb.de/PhD
Bitte beziehen Sie sich bei Ihrer Bewerbung auf jobvector und geben Sie die folgende Referenznummer an: JV-C9-CN2

Über Institute of Molecular Biology gGmbH

Our International PhD Programme on the “Gene Regulation, Epigenetics and DNA Damage Response” gives talented and enthusiastic students the opportunity to undertake PhD research at the cutting edge of modern biology. Our groups cover a broad range of expertise and include leading biochemists, geneticists, cell and developmental biologists who study the molecular mechanisms of...

Mehr über die Institute of Molecular Biology gGmbH

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